Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936275.1_cds_XP_016481903.1_73186
CDS Infomation

[gene=LOC107802840] [db_xref=GeneID:107802840] [protein=SNF1-related protein kinase catalytic subunit alpha KIN10-like] [protein_id=XP_016481903.1] [location=complement(join(108649..108765,109069..109296,109372..109497,110247..110330,110655..110744,111209..111394,111496..111627,111717..111899,112037..112221,112411..112594))] [gbkey=CDS]
Sequence

ATGAGTAGCAGAGGTGGTGGAACTACAGATACTCCTTTTCTAAGGAACTACAGGCTTGGT
AAAACTCTTGGCCATGGATCCTTTGGTAAAGTTAAAATTGCTGAGCATTTGCTGACTGGG
CACAAAGTGGCTATCAAAATCCTTAACCGTCGAAAAATGAAGACTCCCGACATGGAGGAA
AAATTGAGAAGAGAAATAAAAATATGTAGATTATTTGTGCATCCACATGTCATACGACTC
TACGAAGTGATAGAGACACCATCGGATATATATGTCGTGATGGAGTATGTTAAGTCTGGT
GAACTCTTTGATTATATTGTAGAAAAGGGCAGGTTACAGGAAGATGAAGCTCGCCATTTT
TTCCAGCAGATTATTGCTGGTGTAGAATACTGCCATAGGAATAGGGTGGTTCATCGGGAC
CTTAAGCCTGAGAATCTGCTTTTGGATGCAAGACACAATGTAAAGATAGCAGATTTTGGC
TTGAGCAACATTATGCGAGATGGCCATTTTCTGAAGACAAGTTGTGGAAGTCCAAATTAT
GCAGCCCCTGAGGTTGTCTCTGGGAAACTTTATGCTGGTCCCGAGGTAGATGTTTGGAGT
TGTGGCGTTATCTTATATGCTCTTCTTTGTGGTACACTTCCTTTTGATGATGAGAATATT
CCTAACCTTTTCAAGAAAATAAAGAGTGGACTCTACACCCTTCCTAGTCATCTATCAGCT
GGAGCTAGGGATTTGATACCAAGGATGCTAATTGTTGACCCTATGAAGCGGATAACCATG
ACTGATATTCGTCAGCACCAGTGGTTCAAAATTCATCTTCCTCGGTATTTGGCCGTCCCT
CCACCTGATGCTATGCAACATCTCAAAAAGCTTGACGAAGAAATTCTCCAGCAAGTAATG
AGGATGGGTTTTGATAGAGACCAGTTGCTTGAATCTTTGCAAAAGAGAATACAAGACGAT
GCTACTGTTGCATACTATCTGGTGTACGACAACCGTTCCTTGGCTTCCAGTGGCTATCTA
GCAGCTGAGTTTCAGGAATCTATGGATGGTTATTCCCCAGGATTGTTTCCAAATCTTGAT
CTACAGCTGTCCACTGGAAATGGAATTTCTCAAGAAGCGAATTTGAGACACCCATTTTCC
AAAGAAAAAAAATGGCTAGTTGGACTTCAGTCTCCAGCAAATCCACGGGAGATCATGAAT
CAGGTTCTTGGGACTCTGCAAGAACTAAATGTTCGATGGAAAAAAATTGGGCACTATAAT
ATGAAGTGTTTATGGTGTCACGATCTTGATTTTCATAGCATGGCCAGCAATCATATGAAT
GATGATCATTTAATTAGCAATGCGACTGCCCTAAGTACACATTTACAGCCACAAACAGCT
GTGAAGTTTGAAATGCAGCTCTACAAAACTCCAGACGACAAATACCTGCTTGATCTCCAA
AGAATTAGCGGTCCGCAGTTCCTCTTCTTGGATTTCTGTGCTGTTTTCATTATGCAGCTG
GAGACACCACAATGA

Peptide Sequence

PEP ID

XP_016481903.1
PEP Infomation

PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nicotiana tabacum]
Sequence

MSSRGGGTTDTPFLRNYRLGKTLGHGSFGKVKIAEHLLTGHKVAIKILNRRKMKTPDMEE
KLRREIKICRLFVHPHVIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARHF
FQQIIAGVEYCHRNRVVHRDLKPENLLLDARHNVKIADFGLSNIMRDGHFLKTSCGSPNY
AAPEVVSGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKSGLYTLPSHLSA
GARDLIPRMLIVDPMKRITMTDIRQHQWFKIHLPRYLAVPPPDAMQHLKKLDEEILQQVM
RMGFDRDQLLESLQKRIQDDATVAYYLVYDNRSLASSGYLAAEFQESMDGYSPGLFPNLD
LQLSTGNGISQEANLRHPFSKEKKWLVGLQSPANPREIMNQVLGTLQELNVRWKKIGHYN
MKCLWCHDLDFHSMASNHMNDDHLISNATALSTHLQPQTAVKFEMQLYKTPDDKYLLDLQ
RISGPQFLFLDFCAVFIMQLETPQ

Transcript Sequence

Gene sequence data has not been registered.